You got some good potential there. Question: What is that creeping up the back of the transom, next to the trolling motor in the sixth picture ?
You've fished out of her some now, so you have a fair idea of what your needs are right now.
Step 1: Get EVERYTHING out of the boat and out of the way.
Step 2: Once she's empty, spend at an hour a day for at least the next week to ten days with a cup of coffee (or whatever) in your hand just staring at her. Think about what you're wanting to do with her now and what you might want to do with her in the future. Some day that three year old girl is gonna be ten, with maybe a couple of siblings. While you're staring at the boat, thinking about what you want your priorties to be, dozens of ideas will come and go until a plan starts to develop in your mind.
Step 3: Now its time to get started. Just remember that every decision you make has a domino effect. Whatever you decide to do at Step A will affect what you are able to do at Step B and onward.